Remove directories from submodules from MANIFEST.in file.
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graft litex/build/sim
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graft litex/soc/software
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graft litex/soc/cores/cpu/lm32/verilog
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graft litex/soc/cores/cpu/minerva/verilog
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graft litex/soc/cores/cpu/mor1kx/verilog
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graft litex/soc/cores/cpu/picorv32/verilog
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graft litex/soc/cores/cpu/rocket/verilog
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graft litex/soc/cores/cpu/vexriscv/verilog
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